Ectocarpus siliculosus intact and degraded RNA
rRNA depletion kit
Efficient ribodepletion for Ectocarpus siliculosus intact and degraded RNA
The Ectocarpus siliculosus intact and degraded RNA riboPOOL is optimized for efficient removal of ribosomal RNA (rRNA) from both degraded and intact from Ectocarpus siliculosus (brown algae) RNA samples, including those derived from FFPE tissue.
Designed to cover the entire rRNA sequence, it is particularly effective for use with degraded RNA (RIN < 7), but is also compatible with high-quality RNA.
Interested in ribosome profiling? Check out our Ectocarpus siliculosus Ribo-Seq riboPOOL.
The Ectocarpus siliculosus intact and degraded RNA riboPOOL covers the following sequences:
| Sequence | Type | Covered |
|---|---|---|
| 28S rRNA | Cytoplasmic | Yes |
| 18S rRNA | Cytoplasmic | Yes |
| 5.8S rRNA | Cytoplasmic | Yes |
| 5S rRNA | Cytoplasmic | Yes |
| 16S rRNA | Mitochondrial | No |
| 12S rRNA | Mitochondrial | No |
Ectocarpus siliculosus, commonly known as the filamentous brown alga, is widely studied as a model organism in phycology. Its relatively simple structure, rapid growth, and close genetic relationship to other brown algae make it an excellent system for investigating marine plant physiology, developmental processes, and responses to environmental factors.
Benefits of using riboPOOLs for rRNA removal
- Enzyme-free, fast & easy workflow
- Compatible with most downstream applications
- Wide range of input RNA amounts
- Possibility of combining with other riboPOOLs
- Compatible with lab automated workflows