Pan-Fungi
rRNA depletion kits
Efficient ribodepletion for fungi
The Pan-Fungi riboPOOL is designed to efficiently remove ribosomal RNA (rRNA) from fungal RNA samples. The product is compatible with most downstream applications, including different next generation sequencing workflows (both short and long-read sequencing).
Available riboPOOL products and their recommended applications:
| Product | Input RNA Quality | Input RNA | Application |
|---|---|---|---|
| Pan riboPOOL | High Quality (RIN>7) | 10 ng- 3 µg | Standard RNA-seq |
| Pan High Input riboPOOL | High Quality (RIN>7) | 5 µg - 30 µg | Standard RNA-seq |
Fungi are a diverse group ranging from yeasts to molds and mushrooms. They play key roles in decomposition, nutrient cycling, medicine, and food production.
Shop riboPOOLs by application
Pan riboPOOL
rRNA depletion for multiple species
High Input
Pan riboPOOL for large RNA quantities
Sequences covered by Pan-Fungi riboPOOLs
| Sequence | Type | Pan | High Input |
|---|---|---|---|
| 28S rRNA | Cytoplasmic | ✓ | ✓ |
| 18S rRNA | Cytoplasmic | ✓ | ✓ |
| 5.8S rRNA | Cytoplasmic | ✓ | ✓ |
| 5S rRNA | Cytoplasmic | ✓ | ✓ |
Pan-Fungi Taxonomic Coverage
The Pan-Fungi riboPOOL is designed for efficient ribodepletion across Fungi. Pan-Fungi riboPOOL probes have been mapped against rRNA sequences of more than 60 Fungi species to ensure uniform coverage across the group.
Would you like to know how well the Pan-Fungi riboPOOL covers your species of interest? Contact us for a free bioinformatic coverage assessment.
Not finding what you are looking for?
All of our riboPOOLs can be customized or combined with different species to provide individual solutions that fit your experiment. Contact us at info@sitools.de for more information.