Mouse-Rat degraded RNA riboPOOL
The Mouse-Rat degraded RNA riboPOOL is designed to efficiently deplete ribosomal RNA (rRNA) from mouse and rat FFPE or degraded RNA samples.
FFPE/degraded riboPOOLs cover the entire rRNA sequence and are designed for heavily degraded RNA samples, with RIN values below 6.
For high-quality and intact (RIN > 7) RNA samples, see Mouse-Rat riboPOOL.
Working on ribosome profiling? Check our Mouse-Rat Ribo-Seq riboPOOL.
The Mouse-Rat riboPOOL covers the following sequences:
| Sequence | Type | Covered |
|---|---|---|
| 28S rRNA | Cytosolic | Yes |
| 18S rRNA | Cytosolic | Yes |
| 5.8S rRNA | Cytosolic | Yes |
| 5S rRNA | Cytosolic | Yes |
| 16S rRNA | Mitochondrial | No |
| 12S rRNA | Mitochondrial | No |
The sequencing of the mouse genome was completed in 2002 as part of the International Mouse Genome Sequencing Consortium (IMGS), while the sequencing of the rat genome was completed in 2004, with the initial sequencing of the Brown Norway strain.
Benefits of using riboPOOLs for rRNA removal
- Enzyme-free, fast & easy workflow
- Compatible with most downstream applications
- Wide range of input RNA amounts
- Possibility of combining with other riboPOOLs
- Compatible with lab automated workflows