Pan-Actinobacteria riboPOOL
The Pan-Actinobacteria riboPOOL is designed to efficiently remove ribosomal RNA (rRNA) from Actinobacteria RNA samples. The product is compatible with most downstream applications, including different next generation sequencing workflows (both short and long-read sequencing).
The Pan-Actinobacteria riboPOOL is optimized for high-quality and intact (RIN > 7) RNA samples.
The Pan-Actinobacteria riboPOOL covers the following sequences:
| Sequence | Type | Covered |
|---|---|---|
| 23S rRNA | Cytosolic | Yes |
| 16S rRNA | Cytosolic | Yes |
| 5S rRNA | Cytosolic | Yes |
Actinobacteria are renowned for their significant contributions to medicine and biotechnology, as they are prolific producers of antibiotics and various bioactive compounds.
The Pan-Actinobacteria riboPOOL was designed using the rRNA sequences from these species as templates:
Actinoplanes teichomyceticus
Amycolatopsis australiensis
Frankia alni
Kibdelosporangium phytohabitans
Kuteria albida
Lechevalieria atacamensis
Nonomuraea zeae
Saccharopolyspora erythraea
Saccharothrix espanaensis
Streptomyces coelicolor
Pan-Actinobacteria Taxonomic Coverage
The Pan-Actinobacteria riboPOOL is designed for efficient ribodepletion in phylum Actinobacteria (Actinomycetota). Pan-Actinobacteria riboPOOL probes have been mapped against rRNA sequences of almost 3000 Actinobacteria species to ensure uniform coverage across the phylum.
Would you like to know how well the Pan-Actinobacteria riboPOOL covers your Actinobacteria species of interest? Contact us for a free bioinformatic coverage assessment. Click here for more information on how our Pan-riboPOOLs are designed.
Benefits of using riboPOOLs for multiple species rRNA depletion
- Enzyme-free, fast & easy workflow
- Compatible with most downstream applications
- Wide range of input RNA amounts
- Possibility of combining with other riboPOOLs
- Compatible with lab automated workflows