Acanthamoeba castellanii Ribo-Seq
rRNA depletion kit
Efficient ribodepletion for Acanthamoeba castellanii
The Acanthamoeba castellanii Ribo-Seq riboPOOL is designed to efficiently remove ribosomal RNA (rRNA) during Ribo-Seq experiments. It’s also fully compatible with total RNA-Seq samples, making it a versatile option for project including both Ribo-Seq and RNA-Seq.
Ribodepletion with riboPOOLs can be easily integrated into Ribo-Seq protocols without requiring modifications to established workflows.
If you're only working with total RNA-Seq (intact or degraded RNA), check out our Acanthamoeba castellani intact and degraded RNA riboPOOL.
The Acanthamoeba castellani Ribo-Seq riboPOOL covers the following sequences:
| Sequence | Type | Covered |
|---|---|---|
| 28S rRNA | Cytoplasmic | Yes |
| 18S rRNA | Cytoplasmic | Yes |
| 5.8S rRNA | Cytoplasmic | Yes |
| 5S rRNA | Cytoplasmic | Yes |
| 12S rRNA | Mitochondrial | No |
| 16S rRNA | Mitochondrial | No |
Acanthamoeba species can act as opportunistic pathogens, causing infections in humans and other organisms. Molecular studies explore the genetic and cellular aspects of host-parasite interactions, aiding in understanding pathogenic mechanisms and immune responses.
Benefits of using riboPOOLs for ribosome profiling
- Enhance the cost-efficiency of sequencing projects
- Facilitate the quantification of translation of rare transcripts
- Customizable rRNA removal solution for any species