Caenorhabditis elegans Ribo-Seq
rRNA depletion kit
Efficient ribodepletion for Caenorhabditis elegans
The Caenorhabditis elegans Ribo-Seq riboPOOL is designed to efficiently remove ribosomal RNA (rRNA) during Ribo-Seq experiments. It’s also fully compatible with total RNA-Seq samples, making it a versatile option for project including both Ribo-Seq and RNA-Seq.
Ribodepletion with riboPOOLs can be easily integrated into Ribo-Seq protocols without requiring modifications to established workflows.
If you're only working with total RNA-Seq check out our Caenorhabditis elegans riboPOOL (for intact RNA) and Caenorhabditis elegans intact/degraded RNA riboPOOL (for intact and degraded RNA).
The Caenorhabditis elegans Ribo-Seq riboPOOL covers the following sequences:
| Sequence | Type | Covered |
|---|---|---|
| 26S rRNA | Cytoplasmic | Yes |
| 18S rRNA | Cytoplasmic | Yes |
| 5.8S rRNA | Cytoplasmic | Yes |
| 5S rRNA | Cytoplasmic | Yes |
| 16S rRNA | Mitochondrial | No |
| 12S rRNA | Mitochondrial | No |
The ease of genetic manipulation in Caenorhabditis elegans has facilitated groundbreaking studies on gene regulation, RNA interference (RNAi), and functional genomics. It has been pivotal in identifying genes that control essential biological processes.
Benefits of using riboPOOLs for ribosome profiling
- Enhance the cost-efficiency of sequencing projects
- Facilitate the quantification of translation of rare transcripts
- Customizable rRNA removal solution for any species