Pristionchus pacificus riboPOOL for ribosome profiling
The Pristionchus pacificus Ribo-Seq riboPOOL is designed to efficiently remove ribosomal RNA (rRNA) from Pristionchus pacificus during Ribo-Seq sample preparation.
Depletion with Ribo-Seq riboPOOLs can be readily integrated into Ribo-Seq workflows without the need of modifications to established protocols.
The Pristionchus pacificus riboPOOL covers the following sequences:
| Sequence | Type | Covered |
|---|---|---|
| 28S rRNA | Cytosolic | Yes |
| 18S rRNA | Cytosolic | Yes |
| 8S rRNA | Cytosolic | Yes |
| 5S rRNA | Cytosolic | No |
| 16S rRNA | Mitochondrial | No |
| 12S rRNA | Mitochondrial | No |
Pristionchus pacificus, a nematode species, is a pivotal subject in molecular studies, particularly in evolutionary developmental biology. Researchers leverage its unique traits, such as a versatile mouth structure and diverse feeding strategies, to explore evolutionary principles and developmental processes.
Benefits of using riboPOOLs for ribosome profiling
- Enhance the cost-efficiency of sequencing projects
- Facilitate the quantification of translation of rare transcripts
- Customizable rRNA removal solution for any species