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Arabidopsis thaliana
rRNA depletion kits
Efficient ribodepletion for Arabidopsis thaliana
Our Arabidopsis thaliana riboPOOLs efficiently remove rRNA from Arabidopsis thaliana RNA samples. The product is compatible with most downstream applications, including different NGS workflows (both short and long-read sequencing).
Available riboPOOL products and their recommended applications:
| Product | Input RNA Quality | Input RNA | Application |
|---|---|---|---|
| Intact RNA | High Quality (RIN>7) | 10 ng- 3 µg | Standard RNA-seq |
| Intact/degraded RNA | Any quality | 10 ng- 3 µg | Standard RNA-seq |
| Ribosome Profiling | Any quality | 10 ng- 3 µg | Ribo-seq |
| High Input RNA | High Quality (RIN>7) | 5 µg - 30 µg | Standard RNA-seq |
Arabidopsis thaliana is a key model organism in plant biology research. Known for its short life cycle and small genome, Arabidopsis serves as a powerful model for investigating plant genetics, developmental biology, and responses to environmental cues.
Shop riboPOOLs by application
Intact RNA
riboPOOL for high-quality samples
Intact and Degraded
riboPOOL for any-quality samples
Ribosome Profiling
riboPOOL for ribo-seq applications
High Input
riboPOOL for large RNA quantities
Not finding what you are looking for?
All of our riboPOOLs can be customized or combined with different species to provide individual solutions that fit your experiment. Contact us at info@sitools.de for more information.
Sequences covered by Arabidopsis thaliana riboPOOLs
| Sequence | Type | Intact RNA | Intact/Degraded RNA | Ribosome Profiling | High Input |
|---|---|---|---|---|---|
| 25S rRNA | Cytoplasmic | ✓ | ✓ | ✓ | ✓ |
| 18S rRNA | Cytoplasmic | ✓ | ✓ | ✓ | ✓ |
| 5.8S rRNA | Cytoplasmic | ✓ | ✓ | ✓ | ✓ |
| 5S rRNA | Cytoplasmic | ✓ | ✓ | ✓ | ✓ |
| 26S rRNA | Mitochondrial | ✓ | ✕ | ✕ | ✓ |
| 18S rRNA | Mitochondrial | ✓ | ✕ | ✕ | ✓ |
| 5S rRNA | Mitochondrial | ✓ | ✕ | ✕ | ✓ |
| 23S rRNA | Plastid | ✓ | ✓ | ✓ | ✓ |
| 16S rRNA | Plastid | ✓ | ✓ | ✓ | ✓ |
| 5S rRNA | Plastid | ✓ | ✓ | ✓ | ✓ |
| 4.5S rRNA | Plastid | ✓ | ✓ | ✓ | ✓ |