Filamentous Fungi
rRNA depletion kits
Efficient ribodepletion for filamentous fungi
The Filamentous Fungi riboPOOL is designed to efficiently remove ribosomal RNA (rRNA) from Filamentous Fungi RNA samples. The product is compatible with most downstream applications, including different next generation sequencing workflows (both short and long-read sequencing).
Available riboPOOL products and their recommended applications:
| Product | Input RNA Quality | Input RNA | Application |
|---|---|---|---|
| Pan riboPOOL | High Quality (RIN>7) | 10 ng- 3 µg | Standard RNA-seq |
| Pan High Input riboPOOL | High Quality (RIN>7) | 5 µg - 30 µg | Standard RNA-seq |
Filamentous fungi are diverse organisms characterized by their thread-like structures known as hyphae.
Shop riboPOOLs by application
Pan riboPOOL
rRNA depletion for multiple species
High Input
Pan riboPOOL for large RNA quantities
Sequences covered by filamentous fungi riboPOOLs
| Sequence | Type | Pan | High Input |
|---|---|---|---|
| 28S rRNA | Cytoplasmic | ✓ | ✓ |
| 18S rRNA | Cytoplasmic | ✓ | ✓ |
| 5.8S rRNA | Cytoplasmic | ✓ | ✓ |
| 5S rRNA | Cytoplasmic | ✓ | ✓ |
Filamentous Fungi Taxonomic Coverage
The Filamentous Fungi riboPOOL was designed using the rRNA sequences from these species as templates:
Debaryomyces hansenii
Diutina catenulata
Geotrichum candidum
Kluyveromyces lactis
Kluyveromyces marxianus
Penicillium camemberti
Penicillium roqueforti
Yarrowia lipolytica
Would you like to know how well the Filamentous Fungi riboPOOL covers your species of interest? Contact us for a free bioinformatic coverage assessment.
Not finding what you are looking for?
All of our riboPOOLs can be customized or combined with different species to provide individual solutions that fit your experiment. Contact us at info@sitools.de for more information.