Pan-Bacteria
Bacteria rRNA depletion kit
Efficient Bacteria rRNA depletion kit for gram negative and gram positive bacteria
This Bacteria rRNA depletion kit (Pan-Bacteria riboPOOL) is designed to efficiently remove ribosomal RNA (rRNA) from gram negative and gram positive bacteria RNA samples. The product is compatible with most downstream applications, including different next generation sequencing workflows (both short and long-read sequencing).
Available riboPOOL products and their recommended applications:
| Product | Input RNA Quality | Input RNA | Application |
|---|---|---|---|
| Pan riboPOOL | High Quality (RIN>7) | 10 ng- 3 µg | Standard RNA-seq |
| Pan High Input riboPOOL | High Quality (RIN>7) | 5 µg - 30 µg | Standard RNA-seq |
Several bacteria are considered model organisms in scientific research due to their unique characteristics, genetic tractability, and relevance to various fields of study.
Shop Bacteria rRNA depletion kit by application
Pan riboPOOL
rRNA depletion for multiple species
High Input
Pan riboPOOL for large RNA quantities
Not finding the Bacteria rRNA depletion kit you are looking for?
All of our riboPOOLs can be customized or combined with different species to provide individual solutions that fit your experiment. Contact us at info@sitools.de for more information.
Sequences covered by Pan-Bacteria riboPOOLs
| Sequence | Type | Pan | High Input |
|---|---|---|---|
| 23S rRNA | Cytoplasmic | ✓ | ✓ |
| 16S rRNA | Cytoplasmic | ✓ | ✓ |
| 5S rRNA | Cytoplasmic | ✓ | ✓ |
Performance
The Pan-Bacteria riboPOOL efficiently depleted > 90% of rRNA across Bacteria.
Figure 1 Remaining rRNA expression of different bacteria species after ribodepletion with Pan-Bacteria riboPOOL. Expression values shown are normalized against a non-depleted total RNA sample.
Pan-Bacteria Taxonomic Coverage
The Pan-Bacteria riboPOOL is designed for efficient ribodepletion across Bacteria. Pan-Bacteria riboPOOL probes have been mapped against rRNA sequences of more than 12,500 Bacteria species to ensure uniform coverage across the taxon.
Would you like to know how well the Pan-Bacteria riboPOOL covers your Bacteria species of interest? Contact us for a free bioinformatic coverage assessment.