Pan-Bird
rRNA depletion kits
Efficient ribodepletion for birds
The Pan-Bird riboPOOL is designed to efficiently remove ribosomal RNA (rRNA) from birds (e.g. Anseriformes, Galliformes) RNA samples. The product is compatible with most downstream applications, including different next generation sequencing workflows (both short and long-read sequencing).
Available riboPOOL products and their recommended applications:
| Product | Input RNA Quality | Input RNA | Application |
|---|---|---|---|
| Pan riboPOOL | High Quality (RIN>7) | 10 ng- 3 µg | Standard RNA-seq |
| Pan High Input riboPOOL | High Quality (RIN>7) | 5 µg - 30 µg | Standard RNA-seq |
Birds are studied to understand diseases such as avian influenza, with broader relevance for disease transmission and host–pathogen interactions.
Shop riboPOOLs by application
Pan riboPOOL
rRNA depletion for multiple species
High Input
Pan riboPOOL for large RNA quantities
Sequences covered by Pan-Bird riboPOOLs
| Sequence | Type | Pan | High Input |
|---|---|---|---|
| 28S rRNA | Cytoplasmic | ✓ | ✓ |
| 18S rRNA | Cytoplasmic | ✓ | ✓ |
| 5.8S rRNA | Cytoplasmic | ✓ | ✓ |
| 5S rRNA | Cytoplasmic | ✓ | ✓ |
| 16S rRNA | Mitochondrial | ✓ | ✓ |
| 12S rRNA | Mitochondrial | ✓ | ✓ |
Pan-Bird Taxonomic Coverage
The Pan-Bird riboPOOL is designed for efficient ribodepletion in birds (class Aves). Pan-Bird riboPOOL probes have been mapped against rRNA sequences of 35 bird species to ensure uniform coverage across the taxon.
Would you like to know how well the Pan-Bird riboPOOL covers your bird species of interest? Contact us for a free bioinformatic coverage assessment.
Not finding what you are looking for?
All of our riboPOOLs can be customized or combined with different species to provide individual solutions that fit your experiment. Contact us at info@sitools.de for more information.