Single-Species riboPOOLs

The best ribodepletion solution for your species

Single-Species riboPOOLs are designed to efficiently target ribosomal RNAs (rRNAs) in a specific organism. Every design aspect of a Single-Species riboPOOL is tailored to its target species. The design workflow takes into account the type and characteristics of the species rRNAs, ensuring the highest specifity between riboPOOL probes and the ribosomal RNA sequences.

The Single-Species riboPOOLs portfolio includes ribodepletion solutions for more than 60 species, from well-established model organisms (e.g. Escherichia coli, Arabidopsis thaliana, Drosophila melanogaster, Caenorhabditis elegans) to lesser-known species, and includes options for RNA-Seq (both high quality and degraded RNA) or for ribosome profiling (Ribo-Seq).

If you can't find your species listed below, contact us to request a custom riboPOOL.

All single-species riboPOOLs (standard RNA-Seq and degraded RNA samples)

rRNA depletion kit for Acetabularia ryukyuensi

Acetabularia ryukyuensi
ID: 120

rRNA depletion for mosquitos (Aedes albopictus)

Aedes albopictus
ID: 47

rRNA depletion for sponges (Amphimedon queenslanadica)

Amphimedon queenslandica
ID: 11

rRNA depletion for amoeba(Anaeramoeba flamelloides))

Anaeramoeba flamelloides
ID: 95

rRNA depletion for spiders (Argiope bruennichi)

Argiope bruennichi
ID: 74

Azolla filiculoides
ID: 79

rRNA depletion for bacteria (Bacillus subtilis)

Bacillus subtilis
ID: 12

Bemisia tabaci
ID: 80

rRNA depletion for green algae (Chlamydomonas reinhardtii)

Chlamydomonas reinhardtii
ID: 71

rRNA depletion from Gram-positive bacteria (Clostridium perfringens)

Clostridium perfringens
ID: 15

rRNA depletion in oysters (Crassostrea gigas

Crassostrea gigas
ID: 63

rRNA depletion for yeast (Cryptococcus neoformans)

Cryptococcus neoformans
ID: 84

rRNA depletion for Drosophila melanogaster

Drosophila melanogaster
ID: 07

rRNA depletion for degraded RNA samples from Drosophila melanogaster

D. melanogaster degraded RNA
ID: 61

rRNA depletion for coccolithophores (Emiliania huxleyi)

Emiliania huxleyi
ID: 33

rRNA depletion for horse (Equus caballus) for degraded RNA samples

Equus caballus degraded RNA
ID: 92

rRNA depletion for bacteria (Eubacterium limosum)

Eubacterium limosum
ID: 70

rRNA depletion for cats (Felis catus) for degraded RNA samples

Felis catus degraded RNA
ID: 93

rRNA depletion for chicken (Gallus gallus domesticus)

Gallus gallus domesticus
ID: 60

rRNA depletion for Archaea (Haloferax volcanii)

Haloferax volcanii
ID: 16

rRNA depletion kit for highly abundant globin mRNA from human blood RNA samples.

Human Globin mRNA
ID: 25

The Human tRNA riboPOOL is designed to efficiently deplete transfer RNA (tRNA) from human RNA samples.

Human tRNA
ID: 317

rRNA depletion for human, mouse and rat degraded RNA samples

H/M/R degraded RNA
ID: 56

rRNA depletion for ticks (Ixodes scapularis)

Ixodes scapularis
ID: 30

rRNA depletion for sea anemone (Nematostella vectensis)

Nematostella vectensis
ID: 87

rRNA depletion for worms (Olavius algarvensis)

Olavius algarvensis
ID: 103

Oryza sativa
ID: 09

rRNA depletion for yeast (Pichia pastoris)

Pichia pastoris (fungi)
ID: 19

rRNA depletion for yeast (Saccharomyces cerevisiae)

Saccharomyces cerevisiae
ID: 05

rRNA depletion for yeast (Saccharomyces cerevisiae) degraded RNA

S. cerevisiae degraded RNA
ID: 125

rRNA depletion for Salmonella enterica (gram-negative bacteria)

Salmonella enterica
ID: 22

Schistosoma mansoni
ID: 90

rRNA depletion for Staphylococccus aureus (gram-positive bacteria) degraded RNA

S. aureus degraded RNA
ID: 132

Stenotro-phomonas sp.
ID: 23

Strongyloides ratti
ID: 106

rRNA depletion for diatoms (Thalassiosira pseudonana)

Thalassiosira pseudonana
ID: 96

Wolbachia pipientis
ID: 86

rRNA depletion for mosquitos (Anopheles gambiae)

Anopheles gambiae
ID: 97

rRNA depletion for bees (Apis mellifera)

Apis mellifera
ID: 73

Arabidopsis thaliana
ID: 08

rRNA depletion for Arabidopsis thaliana degraded RNA

A. thaliana degraded RNA
ID: 123

rRNA depletion for C. elegans for RNA-Seq

Caenorhabditis elegans
ID: 39

rRNA depletion for C. elegans for degraded RNA samples

C. elegans deg. RNA
ID: 62

rRNA depletion for bacteria (Caulobacter crescentus)

Caulobacter crescentus
ID: 13

rRNA depletion for rodents (Chinchilla lanigera)

Chinchilla lanigera
ID: 14

rRNA depletion for gram negative bacteria (Cupriavidus necator)

Cupriavidus necator
ID: 102

Danio rerio
ID: 10

rRNA depletion for fish (Danio rerio) degraded RNA

Danio rerio degraded RNA
ID: 121

The Deroceras laeve riboPOOL is designed to efficiently remove ribosomal RNA (rRNA) from Deroceras laeve (marsh slug) RNA samples

Deroceras laeve
ID: 133

Escherichia coli
ID: 04

rRNA depletion for Escherichia coli degraded RNA

E. coli degraded RNA
ID: 122

The Escherichia coli tRNA riboPOOL is designed to efficiently deplete transfer RNA (tRNA) from Escherichia coli RNA samples.

Escherichia coli tRNA
ID: 334

Efficient ribodepletion for Ectocarpus siliculosus (brown algae) degraded RNA

E. siliculosus degraded RNA
ID: 130

Human
ID: 54

rRNA depletion kit for rRNA and mRNA globin from human total RNA

Human Blood
ID: 94

rRNA depletion kit for cytoplasmatic ribosomal RNA from human RNA samples

Human Cytoplasm
ID: 98

rRNA depletion for human degraded RNA samples

Human degraded RNA
ID: 57

rRNA depletion for beetles (Leptinotarsa decemlineata)

Leptinotarsa decemlineata
ID: 72

rRNA depletion for blood parasites (Leishmania mexicana)

L. mexicana degraded RNA
ID: 126

rRNA depletion for mouse and rat degraded RNA samples

Mouse-Rat degraded RNA
ID: 58

Mouse tRNA
ID: 322

rRNA depletion for Pinus sylvestris (pine tree)

Pinus sylvestris
ID: 108

rRNA depletion for stink bugs (Plautia stali)

Plautia stali
ID: 20

Efficient ribodepletion for Pristionchus pacificus degraded RNA

P. pacificus deg. RNA
ID: 127

rRNA depletion from gram-negative bacteria (Pseudomonas aeruginosa)

Pseudomonas aeruginosa
ID: 18

rRNA depletion for yeast (Schizosaccharomyces pombe)

S. pombe
ID: 59

rRNA depletion for Schmidtea mediterranea (triclad)

Schmidtea mediterranea
ID: 28

rRNA depletion for moth (Spodoptera exigua)

Spodoptera exigua
ID: 85

rRNA depletion in Staphylococccus aureus (gram-positive bacteria)

Staphylococccus aureus
ID: 21

rRNA depletion for blood parasite (Trypanosoma brucei)

Trypanosoma brucei deg. RNA
ID: 128

rRNA depletion for blood parasite (Toxoplasma gondii)

Toxoplasma gondii deg. RNA
ID: 129

Ustilago maydis
ID: 24

rRNA depletion for mites (Varroa destructor)

Varroa destructor
ID: 81

Designing a Single-Species riboPOOL

Choosing the best probes for ribodepletion

Step 1. Bioinformatics Design

Our algorithm scans the rRNA sequences to choose the best probes. Ensuring maximum and optimal rRNA coverage, optimal binding to rRNA sequences, and avoidance of targeting similar genes.

HPLC is used to refine rRNA depletion kits

Step 2. Laboratory Production

riboPOOLs are manufactured in accordance with strict Quality Management standards. HPLC is used to refine riboPOOLs to ensure the highest purity levels.

Step 3. Testing the riboPOOL

When ordering a riboPOOL you receive a reliable ribodepletion solution for your target species. riboPOOLs show high rRNA depletion efficacy across species, reaching up to 99% depletion rate.

Reproducible and efficient rRNA removal

riboPOOLs show high rRNA depletion efficacy across species, reaching up to 99%. For strongly degraded RNA samples we offer optimized riboPOOLs to achieve even & efficient rRNA removal of up to 95%. To meet the special requirements of ribosome profiling (Ribo-Seq) we develop dedicated Ribo-Seq riboPOOLs for a growing number of species.

Figure 1 Bioanalyzer profiles of Human total RNA before and after depletion with Human riboPOOL.

Figure 2 Bioanalyzer profiles of Anopheles gambiae total RNA before and after depletion with the Anopheles gambiae riboPOOL.